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//
// This is the *BASIC* version of IORT, a Geant4-based application
//
// Main Authors: G.Russo(a,b), C.Casarino*(c), G.C. Candiano(c), 
//  G.A.P. Cirrone(d), F.Romano(d)
// Contributor Authors: S.Guatelli(e)
// Past Authors: G.Arnetta(c), S.E.Mazzaglia(d)
//    
//   (a) Fondazione Istituto San Raffaele G.Giglio, Cefalù, Italy
//   (b) IBFM-CNR , Segrate (Milano), Italy
//   (c) LATO (Laboratorio di Tecnologie Oncologiche), Cefalù, Italy
//   (d) Laboratori Nazionali del Sud of the INFN, Catania, Italy
//   (e) University of Wallongong, Australia
//
//   *Corresponding author, email to carlo.casarino@polooncologicocefalu.it
//////////////////////////////////////////////////////////////////////////////////////////////

#include "IORTAnalysisFileMessenger.hh"
#include "IORTAnalysisManager.hh"
#include "G4UIcmdWithAString.hh"
#include "G4UIcmdWithABool.hh"
#include "G4UIdirectory.hh"

#include "IORTMatrix.hh"

/////////////////////////////////////////////////////////////////////////////
IORTAnalysisFileMessenger::IORTAnalysisFileMessenger(IORTAnalysisManager* amgr) :
  AnalysisManager(amgr)
{  
  secondaryCmd = new G4UIcmdWithABool("/analysis/secondary",this);
  secondaryCmd -> SetParameterName("secondary", true);
  secondaryCmd -> SetDefaultValue("true");
  secondaryCmd -> SetGuidance("Set if dose/fluence for the secondary particles will be written" 
				"\n[usage]: /analysis/secondary [true/false]"); 
  secondaryCmd -> AvailableForStates(G4State_Idle, G4State_PreInit);

  DoseMatrixCmd = new G4UIcmdWithAString("/analysis/writeDoseFile",this);
  DoseMatrixCmd->SetGuidance("Write the dose/fluence to an ASCII file");
  DoseMatrixCmd->SetDefaultValue("Dose.out");
  DoseMatrixCmd->SetParameterName("choice",true); 

  // With this messenger you can:
  // give a name to the generated .root file
  // One can use this messenger to define a different .root file name other then the default one 
  FileNameCmd = new G4UIcmdWithAString("/analysis/setAnalysisFile",this);
  FileNameCmd->SetGuidance("Set the .root filename for the root-output");
  FileNameCmd->SetDefaultValue("default.root");
  FileNameCmd->SetParameterName("choice",true); ///<doc did not say what second boolean really does
  FileNameCmd->AvailableForStates(G4State_Idle,G4State_PreInit);


}

/////////////////////////////////////////////////////////////////////////////
IORTAnalysisFileMessenger::~IORTAnalysisFileMessenger()
{
  delete secondaryCmd; 
  delete DoseMatrixCmd; 
  delete FileNameCmd;
}

/////////////////////////////////////////////////////////////////////////////
void IORTAnalysisFileMessenger::SetNewValue(G4UIcommand* command, G4String newValue)
{ 
    if (command == secondaryCmd)
    {
	if (IORTMatrix::GetInstance())
	{
	    IORTMatrix::GetInstance() -> secondary = secondaryCmd -> GetNewBoolValue(newValue);
	}
    }

    else if (command == DoseMatrixCmd) // Filename can be passed here TODO 
    { 
	if ( IORTMatrix * pMatrix = IORTMatrix::GetInstance() )
	{
	    pMatrix -> TotalEnergyDeposit(); 
	    pMatrix -> StoreDoseFluenceAscii(newValue);
	    pMatrix -> StoreDoseFluenceRoot();
	    // Finalize & write output file 
	    IORTAnalysisManager::GetInstance() -> flush();     
	}
    }
    else if (command == FileNameCmd)
      {
	AnalysisManager->SetAnalysisFileName(newValue);
	IORTAnalysisManager::GetInstance() -> book(); // Book for a new output file 
      }
}

